Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015807033.1_cds_XP_016494650.1_9042
CDS Infomation

[gene=LOC107813855] [db_xref=GeneID:107813855] [protein=probable aminotransferase ACS10 isoform X2] [protein_id=XP_016494650.1] [location=join(21610..22113,22912..23037,24567..24727,24824..25667)] [gbkey=CDS]
Sequence

ATGACAAGGTCCCGGGACCGTTCACCAACAAGAACAACAACAACAACCATTTCAACTGGC
GGCGGCGGAGGAGCGGCGGCGGCGATGAGGGTAATAGTACCCTTACAAGGAGTAGTACAA
GGCCGAGGTGGTCTTTTTTTCGGTTCAGTTATACCTTGTGCTCTTTTCTACTTCTGGCAA
CTCTACCTCAAACGTAATCGTTCTTCCGGTGACGACAATACCGGCGAATCTACGGCTCCG
GCGAGGTCTCCGTCGTCGAGCCATTTGGCGGAAGTGTCGTCTTCTAGTTCAGGAGGGTTA
CAGAGAGTTCAGTCGTCACGTTTATTACTGTCACCTAAGGGAGCTACTGGGCCCACTCAA
GTGTCTTCAAGAGCTAATTCTATTATTTCTAAACAAAGTGATAGTAGTCCTTACTATATT
GGATTAAAAAGAGCTTCTGAGGATCCTTATGATGAAGCAAGTAACCCAGATGGTGTTATT
CAACTTGGATTAGCAGAAAACAAGTTGTCATTGGATTTAATTCAAGAATGGCTGGAAGAA
AATATGTCAAAATGGATGATGAATCAGGATCTGAGTATAAGTGGAATAGCTACTTATCAA
CCATTTGATGGGTTGTTGGAGTTGAAAGTGGCCGTGGCAGGATTTATGTCTCAAGCTGTG
GAGAAATCAGTGTCCTTCAGCCCCTCTCAAATGGTTCTTACCGCTGGTGCAACTCCTGCG
CTTGAGATACTGAGCTTCTGCCTAGCTGATCCTGGAAATGCATTTCTTGTTCCCTCACCA
TATTATCCTGAGGATGTCAAATGGCGAACTGGAGTGGAGATTATACCTGTTCCTTGCCGC
AGTGCAGACAACTTTAGCTTGAGTATTGATGCTCTTGACCGAGCGCTTAATCAAGCCAAG
AAACGTGGTCTTAAAGTACGAGGGATTATTATTTCTAACCCCTCAAATCCCGTAGGCAAT
CTGTTCACTAGGGAGACACTGTATAACCTCTTAGACTTTGCAACTGAGAAGAACATCCAC
GTAATATCCAATGAAATCTTGGCTGGGTCTTATGGAAGTGAAGAGTTTGTCAGCATAGCA
GAGATAATTGATTCTGAAGATTTTGACCGGAACAGGGTCCACATTGTCTATGGTCTCTCT
AAGGACCTCTCTCTTCCTGGTTTCAGGGTGGGGGTAATCTATTCTTGCAATGAAAATGTT
CTAGCTGCTGCAAAAAAGTTGACAAGATTCTCATCCATTTCAGTGCCAACACAGCATTTG
CTCATTCAGATGCTATCAGATGCAAAATTTGTGCAACAATTTATCAAAAAGAATAGAGAG
AGGCTCAAAAGGACGTATTCTCTGTTTGTTAGTGGATTGAAGCAGCTGGGAATTGAGTGC
ACCAAAAGTAGCGGGGGCTTCTACTGTTGGGCTGACATGAGCAGGTTAATTCGATCATAT
AGTGAAAAGGGGGAGATTGAGCTTTGGGATAAGCTACTAAATGTAGCTAAGATCAATGTA
ACTCCTGGTTCTTCCTGCCACTGCGTTGAACCTGGGTGGTTCAGGTTATGTTTTACGACC
TTAAGTGAGAAGGATATTTCCACAGTTATGCAACGTATTCAGAAAGTTTTGGAGATGCGC
AGGTCTCTGAGTTAA

Peptide Sequence

PEP ID

XP_016494650.1
PEP Infomation

PREDICTED: probable aminotransferase ACS10 isoform X2 [Nicotiana tabacum]
Sequence

MTRSRDRSPTRTTTTTISTGGGGGAAAAMRVIVPLQGVVQGRGGLFFGSVIPCALFYFWQ
LYLKRNRSSGDDNTGESTAPARSPSSSHLAEVSSSSSGGLQRVQSSRLLLSPKGATGPTQ
VSSRANSIISKQSDSSPYYIGLKRASEDPYDEASNPDGVIQLGLAENKLSLDLIQEWLEE
NMSKWMMNQDLSISGIATYQPFDGLLELKVAVAGFMSQAVEKSVSFSPSQMVLTAGATPA
LEILSFCLADPGNAFLVPSPYYPEDVKWRTGVEIIPVPCRSADNFSLSIDALDRALNQAK
KRGLKVRGIIISNPSNPVGNLFTRETLYNLLDFATEKNIHVISNEILAGSYGSEEFVSIA
EIIDSEDFDRNRVHIVYGLSKDLSLPGFRVGVIYSCNENVLAAAKKLTRFSSISVPTQHL
LIQMLSDAKFVQQFIKKNRERLKRTYSLFVSGLKQLGIECTKSSGGFYCWADMSRLIRSY
SEKGEIELWDKLLNVAKINVTPGSSCHCVEPGWFRLCFTTLSEKDISTVMQRIQKVLEMR
RSLS

Transcript Sequence

Gene sequence data has not been registered.